Description

proprotein convertase subtilisin/kexin type 5 [Source:MGI Symbol;Acc:MGI:97515]

Location
INSDC coordinates

chromosome:GRCm38:CM001012.2:17432832:17837632:1

About this gene

This gene has 2 transcripts (splice variants), 64 orthologues, 6 paralogues, is a member of 1 Ensembl protein family and is associated with 2 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Pcsk5-201ENSMUST0000002561866751877aaENSMUSP00000025618
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50401Q04592 NM_001190483
NP_001177412
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P4

PRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Pcsk5-202ENSMUST000000507155783915aaENSMUSP00000050272
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50402Q04592 Q91VK0 NM_001163144
NP_001156616
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays