Description

mitochondrial ribosomal protein L40 [Source:MGI Symbol;Acc:MGI:1332635]

Location
INSDC coordinates

chromosome:GRCm38:CM001009.2:18872018:18876767:1

About this gene

This gene has 2 transcripts (splice variants), 62 orthologues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Mrpl40-001ENSMUST000000233911185206aaENSMUSP00000023391
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28030Q3UKS6 Q9Z2Q5 NM_010922
NP_035052
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Mrpl40-002ENSMUST00000119273778162aaENSMUSP00000113065
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z7C0 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays