Description

syntaxin 5A [Source:MGI Symbol;Acc:MGI:1928483]

Location
INSDC coordinates

chromosome:GRCm38:CM001012.2:8741413:8756069:1

Transcripts

This gene has 19 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Stx5a-001ENSMUST000001763812251 bp355 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29542H3BJ02 H3BJ89 H3BJE3
H3BKD6 H3BKP3 Q8K1E0
NM_001167799
NP_001161271
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Stx5a-002ENSMUST000000734302112 bp355 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29542H3BJ02 H3BJ89 H3BJE3
H3BKD6 H3BKP3 Q8K1E0
NM_019829
NP_062803
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Stx5a-004ENSMUST000000102541780 bp442 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BJE3 H3BKD6 I1E4X1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Stx5a-013ENSMUST000001759011153 bp262 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BJE3 H3BKD6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Stx5a-018ENSMUST000001769681049 bp109 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BJ89 H3BKP3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Stx5a-007ENSMUST00000177373995 bp259 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BJ02 H3BJ89 H3BKP3
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Stx5a-019ENSMUST00000176570563 bp57 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BJ89 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Stx5a-012ENSMUST00000176314378 bp77 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BKD6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Stx5a-003ENSMUST000001760132106 bp144 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BKD6 H3BKP0 -
Stx5a-006ENSMUST000001758721720 bp234 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BKD6 H3BKJ7 -
Stx5a-005ENSMUST000001773221697 bp101 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BL25 -
Stx5a-010ENSMUST000001760933015 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--NR_105958
Stx5a-014ENSMUST000001762601025 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx5a-017ENSMUST00000175834789 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx5a-015ENSMUST00000176009774 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx5a-016ENSMUST00000176182670 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx5a-009ENSMUST00000176404584 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx5a-011ENSMUST00000175642523 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx5a-008ENSMUST00000176844419 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays