Gene: C1qtnf7 ENSMUSG00000061535

Description

C1q and tumor necrosis factor related protein 7 [Source:MGI Symbol;Acc:MGI:1925911]

Gene Synonyms

5530401N20Rik, 8430425G24Rik, CTRP7

Location

Chromosome 5: 43,672,881-43,776,145 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues, 20 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000076939.10	C1qtnf7-201	3879	296aa	ENSMUSP00000076206.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51488	E9PVG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000121872.3	C1qtnf7-202	1283	289aa	ENSMUSP00000113520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19262	Q5BKS0 Q8BVD7	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000144558.3	C1qtnf7-203	649	67aa	ENSMUSP00000120917.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YZZ1	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,