Gene: Mcmdc2 ENSMUSG00000046101

Description

minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]

Gene Synonyms

6030422M02Rik

Location

Chromosome 1: 9,978,863-10,012,310 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 6 transcripts (splice variants), 186 orthologues, 8 paralogues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000140948.9	Mcmdc2-204	3249	692aa	ENSMUSP00000120577.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000052843.12	Mcmdc2-201	2826	347aa	ENSMUSP00000054715.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9Q956-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000171802.8	Mcmdc2-205	2553	681aa	ENSMUSP00000128620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48215	E9Q956	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000118098.3	Mcmdc2-202	2072	358aa	ENSMUSP00000112851.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0A0MQF4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000125294.9	Mcmdc2-203	2003	604aa	ENSMUSP00000120858.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H9KV11	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000183059.2	Mcmdc2-206	749	25aa	ENSMUSP00000138182.2	Nonsense mediated decay		S4R1E1	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,