Gene: Trpa1 ENSMUSG00000032769

Description

transient receptor potential cation channel, subfamily A, member 1 [Source:MGI Symbol;Acc:MGI:3522699]

Gene Synonyms

ANKTM1

Location

Chromosome 1: 14,942,872-14,989,086 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 2 transcripts (splice variants), 226 orthologues and is associated with 23 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000041447.5	Trpa1-201	4263	1125aa	ENSMUSP00000043594.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35516	Q8BLA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000235071.2	Trpa1-202	3288	1095aa	ENSMUSP00000157371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		V5TCP9	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,