Gene: Sdsl ENSMUSG00000029596

Description

serine dehydratase-like [Source:MGI Symbol;Acc:MGI:2182607]

Gene Synonyms

4432411H13Rik, SDH1, SDS-RS1

Location

Chromosome 5: 120,596,251-120,610,875 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 3 transcripts (splice variants), 198 orthologues, 5 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000031594.13	Sdsl-201	1476	329aa	ENSMUSP00000031594.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19618	Q8R238	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000052258.14	Sdsl-202	1225	329aa	ENSMUSP00000058198.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19618	Q8R238	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000132916.2	Sdsl-203	438	120aa	ENSMUSP00000120868.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3Z0F6	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,