Gene: Ostf1 ENSMUSG00000024725

Description

osteoclast stimulating factor 1 [Source:MGI Symbol;Acc:MGI:700012]

Gene Synonyms

C78236, SH3P2, Sh3d3

Location

Chromosome 19: 18,493,501-18,609,187 reverse strand.

GRCm39:CM001012.3

About this gene

This gene has 5 transcripts (splice variants), 218 orthologues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025631.7	Ostf1-201	2726	215aa	ENSMUSP00000025631.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37930	Q62422	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000236615.2	Ostf1-204	974	212aa	ENSMUSP00000157998.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BA97	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000236728.2	Ostf1-205	1322	38aa	ENSMUSP00000157475.2	Nonsense mediated decay		A0A494B943	-
ENSMUST00000156908.8	Ostf1-203	2816	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000138860.2	Ostf1-202	516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,