Gene: Spib ENSMUSG00000008193

Description

Spi-B transcription factor (Spi-1/PU.1 related) [Source:MGI Symbol;Acc:MGI:892986]

Gene Synonyms

Spi-B

Location

Chromosome 7: 44,175,417-44,181,495 reverse strand.

GRCm39:CM001000.3

About this gene

This gene has 3 transcripts (splice variants), 100 orthologues, 27 paralogues and is associated with 14 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000098483.9	Spib-202	853	284aa	ENSMUSP00000096084.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0X1KG64	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000035323.6	Spib-201	2788	267aa	ENSMUSP00000035539.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21209	O35906	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000205506.2	Spib-203	802	267aa	ENSMUSP00000145968.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0U1RPG0	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,