Gene: Htr4 ENSMUSG00000026322

Description

5 hydroxytryptamine (serotonin) receptor 4 [Source:MGI Symbol;Acc:MGI:109246]

Gene Synonyms

5-HT4, 5-HT<4L>

Location

Chromosome 18: 62,457,275-62,629,648 forward strand.

GRCm39:CM001011.3

About this gene

This gene has 4 transcripts (splice variants), 199 orthologues, 32 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000027560.8	Htr4-201	4661	388aa	ENSMUSP00000027560.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29291	P97288-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237114.2	Htr4-203	1389	377aa	ENSMUSP00000157982.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BA82	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000236691.2	Htr4-202	1267	363aa	ENSMUSP00000157470.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P97288-4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000238081.2	Htr4-204	1203	387aa	ENSMUSP00000157967.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P97288-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,