Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: MGP_CAROLIEiJ_T0010642.1

Description

C-type lectin domain containing 7A [Source:NCBI gene;Acc:110296749]

Location

Chromosome 6: 126,358,085-126,367,996 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene MGP_CAROLIEiJ_G0008957.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0010641.1	-	2277	244aa	MGP_CAROLIEiJ_P0010641	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0010642.1	-	708	199aa	MGP_CAROLIEiJ_P0010642	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0010640.1	-	2272	244aa	MGP_CAROLIEiJ_P0010640	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-
MGP_CAROLIEiJ_T0010643.1	-	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0076337.1	-	2053	199aa	MGP_CAROLIEiJ_P0076337	Unknown likely coding	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 708 bps, Translation length: 199 residues

Version

MGP_CAROLIEiJ_T0010642.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_CAROLIEiJ_T0010642.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_CAROLIEiJ_T0010642.1

Summary

About Us

Get help

Our sister sites

Follow us