Transcript: ENST00000617216.1 MAMDC2-203

Description

MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]

Gene Synonyms

MGC21981

Location

Scaffold HSCHR9_1_CTG3: 19,469-152,599 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 27 domains and features and maps to 330 oligo probes.

Gene

This transcript is a product of gene ENSG00000278608.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000617216.1	MAMDC2-203	2265	549aa	ENSP00000485495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0G2JQ91	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000619405.1	MAMDC2-204	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,265 bps, Translation length: 549 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000617216.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000617216.1 MAMDC2-203

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Transcript: ENST00000617216.1 MAMDC2-203

Summary

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