Description

synaptic Ras GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:11497]

Synonyms

SYNGAP, RASA5, KIAA1938

Location
About this transcript

This transcript has 20 exons, is annotated with 32 domains and features, is associated with 881 variations and maps to 774 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SYNGAP1-208ENST00000629380.298621343aaENSP00000486463
 
Protein coding
CCDS34434Q96PV0 NM_006772
NP_006763
TSL:2GENCODE basicAPPRIS P1
SYNGAP1-202ENST00000418600.658281285aaENSP00000403636
 
Protein coding
-Q96PV0 -TSL:5GENCODE basic
SYNGAP1-203ENST00000428982.443391284aaENSP00000412475
 
Protein coding
-Q96PV0 -TSL:5GENCODE basic
SYNGAP1-207ENST00000628646.242641299aaENSP00000486431
 
Protein coding
-Q96PV0 -TSL:5GENCODE basic
SYNGAP1-204ENST00000449372.639301306aaENSP00000416519
 
Protein coding
-B7ZCA0 NP_001123538
CDS 3' incompleteTSL:5
SYNGAP1-218ENST00000636905.112325aaENSP00000489938
 
Protein coding
-A0A1B0GU28 -CDS 3' incompleteTSL:5
SYNGAP1-201ENST00000293748.945561284aaENSP00000293748
 
Nonsense mediated decay
-A0A0A0MQZ2 -CDS 5' incompleteTSL:5
SYNGAP1-228ENST00000638142.22499592aaENSP00000490803
 
Nonsense mediated decay
-A0A1B0GW70 -TSL:5
SYNGAP1-209ENST00000635885.1191No protein-
 
Processed transcript
---TSL:5
SYNGAP1-224ENST00000637721.1190No protein-
 
Processed transcript
---TSL:5
SYNGAP1-211ENST00000636116.1161No protein-
 
Processed transcript
---TSL:5
SYNGAP1-212ENST00000636146.1161No protein-
 
Processed transcript
---TSL:5
SYNGAP1-225ENST00000637911.1157No protein-
 
Processed transcript
---TSL:5
SYNGAP1-210ENST00000636075.1148No protein-
 
Processed transcript
---TSL:5
SYNGAP1-226ENST00000637967.1148No protein-
 
Processed transcript
---TSL:5
SYNGAP1-221ENST00000637490.1132No protein-
 
Processed transcript
---TSL:5
SYNGAP1-216ENST00000636640.1118No protein-
 
Processed transcript
---TSL:5
SYNGAP1-213ENST00000636193.1100No protein-
 
Processed transcript
---TSL:5
SYNGAP1-214ENST00000636436.1100No protein-
 
Processed transcript
---TSL:5
SYNGAP1-217ENST00000636731.1100No protein-
 
Processed transcript
---TSL:5
SYNGAP1-219ENST00000637052.1100No protein-
 
Processed transcript
---TSL:5
SYNGAP1-220ENST00000637194.1100No protein-
 
Processed transcript
---TSL:5
SYNGAP1-222ENST00000637587.1100No protein-
 
Processed transcript
---TSL:5
SYNGAP1-223ENST00000637671.1100No protein-
 
Processed transcript
---TSL:5
SYNGAP1-227ENST00000638127.1100No protein-
 
Processed transcript
---TSL:5
SYNGAP1-215ENST00000636443.179No protein-
 
Processed transcript
---TSL:5
SYNGAP1-206ENST00000479510.22073No protein-
 
Retained intron
---TSL:2
SYNGAP1-205ENST00000470232.1394No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,556 bps, Translation length: 1,284 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000293748.9

Type

Known nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript-based displays