Transcript: ENST00000552698.5 GLYCAM1-205

Description

glycosylation dependent cell adhesion molecule 1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:18023]

Location

Chromosome 12: 54,608,233-54,610,429 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 890 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSG00000293392.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000550226.5	GLYCAM1-204	781	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000552698.5	GLYCAM1-205	668	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000546607.5	GLYCAM1-202	553	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000547350.1	GLYCAM1-203	509	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 668 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000552698.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000552698.5 GLYCAM1-205

Summary

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Transcript: ENST00000552698.5 GLYCAM1-205

Summary

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