Transcript: ENST00000600419.5 ERVK-28-203

Description

endogenous retrovirus group K member 28 [Source:HGNC Symbol;Acc:HGNC:44981]

Location

Chromosome 19: 27,638,483-27,640,638 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1445 variant alleles and maps to 335 oligo probes.

Gene

This transcript is a product of gene ENSG00000267696.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000589010.1	ERVK-28-201	308	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000600419.5	ERVK-28-203	457	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000598435.1	ERVK-28-202	400	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 457 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000600419.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000600419.5 ERVK-28-203

Summary

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Transcript: ENST00000600419.5 ERVK-28-203

Summary

About Us

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