Description

hemoglobin, beta [Source:HGNC Symbol;Acc:HGNC:4827]

Synonyms

beta-globin, CD113t-C, HBD

Location
Gene

This transcript is a product of gene ENSG00000244734

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
HBB-001ENST00000335295628147 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7753B3VL12 B5ANL9 D5FZW3
D9YZU5 E9M263 F8W6P5
J7LKS8 K4EN30 P68871
Q0Z944 Q14484 Q6VFQ5
Q7Z2K5 Q86VF0 Q9BXA2
Q9GZL9 Q9H1I6
NM_000518
NP_000509
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
HBB-004ENST0000038031550290 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B3VL12 B5ANL9 D5FZW3
E9M263 F8W6P5 J7LKS8
K4EN30 Q14484 Q7Z2K5
Q86VF0 Q9BXA2 Q9H1I6
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HBB-002ENST00000485743680No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HBB-003ENST00000475226319No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 3 Coding exons: 3 Transcript length: 628 bps Translation length: 147 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7753

Uniprot

This transcript corresponds to the following Uniprot identifiers: P68871

Transcript Support Level

1

Ensembl version

ENST00000335295.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays