Transcript: ENST00000445606.2 LINC01370-202

Description

long intergenic non-protein coding RNA 1370 [Source:HGNC Symbol;Acc:HGNC:50608]

Gene Synonyms

HI-LNC25

Location

Chromosome 20: 40,004,280-40,008,525 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1721 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSG00000237767.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000668047.2	LINC01370-207	1645	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000669808.1	LINC01370-209	2584	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000664271.1	LINC01370-204	2441	No protein	-	lncRNA	-	-
ENST00000665038.1	LINC01370-205	1977	No protein	-	lncRNA	-	-
ENST00000656861.1	LINC01370-203	1408	No protein	-	lncRNA	-	-
ENST00000667567.1	LINC01370-206	1327	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000670996.1	LINC01370-210	1282	No protein	-	lncRNA	-	-
ENST00000669216.1	LINC01370-208	1196	No protein	-	lncRNA	-	-
ENST00000445606.2	LINC01370-202	1043	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000701153.1	LINC01370-211	756	No protein	-	lncRNA	-	-
ENST00000432633.1	LINC01370-201	538	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,043 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000445606.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000445606.2 LINC01370-202

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Transcript: ENST00000445606.2 LINC01370-202

Summary

About Us

Get help

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