Transcript: ENST00000436592.5 LINC01554-202

Description

long intergenic non-protein coding RNA 1554 [Source:HGNC Symbol;Acc:HGNC:24687]

Gene Synonyms

C5ORF27, FIS, FLJ38821

Location

Chromosome 5: 95,852,232-95,860,133 forward strand.

About this transcript

This transcript has 4 exons, is associated with 3293 variant alleles and maps to 349 oligo probes.

Gene

This transcript is a product of gene ENSG00000236882.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000656444.1	LINC01554-204	1585	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000436592.5	LINC01554-202	2052	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000357880.8	LINC01554-201	1917	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000620167.1	LINC01554-203	1443	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000702482.1	LINC01554-205	1386	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,052 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000436592.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000436592.5 LINC01554-202

Summary

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Transcript: ENST00000436592.5 LINC01554-202

Summary

About Us

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