Transcript: ENST00000663229.1 GCSIR-206

Description

GPR55 cis regulatory suppressor of immune response RNA [Source:HGNC Symbol;Acc:HGNC:54400]

Gene Synonyms

LNC-ITM2C-1

Location

Chromosome 2: 230,886,509-230,904,693 forward strand.

About this transcript

This transcript has 4 exons, is associated with 7880 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000232520.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000663229.1	GCSIR-206	1952	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000670310.1	GCSIR-207	3314	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415628.1	GCSIR-201	1765	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000658438.1	GCSIR-205	930	No protein	-	lncRNA	-	-
ENST00000447074.1	GCSIR-203	557	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000455128.1	GCSIR-204	544	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000434807.1	GCSIR-202	513	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,952 bps,

Version

ENST00000663229.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000663229.1 GCSIR-206

Summary

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Transcript: ENST00000663229.1 GCSIR-206

Summary

About Us

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