Transcript: ENST00000642149.1

Description

novel transcript

Location

Chromosome 6: 8,102,737-8,343,139 forward strand.

About this transcript

This transcript has 6 exons, is associated with 103767 variant alleles and maps to 73 oligo probes.

Gene

This transcript is a product of gene ENSG00000232234.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000642149.1	-	1400	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439891.3	-	1127	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000643749.1	-	1062	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000644216.1	-	997	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000643735.1	-	867	No protein	-	lncRNA	-	-
ENST00000654327.1	-	817	No protein	-	lncRNA	-	-
ENST00000642688.1	-	809	No protein	-	lncRNA	-	-
ENST00000647315.1	-	610	No protein	-	lncRNA	-	-
ENST00000646387.1	-	565	No protein	-	lncRNA	-	-
ENST00000644310.1	-	539	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,400 bps,

Version

ENST00000642149.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000642149.1

Summary

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Transcript: ENST00000642149.1

Summary

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