Transcript: ENST00000661025.1 LINC01445-207

Description

long intergenic non-protein coding RNA 1445 [Source:HGNC Symbol;Acc:HGNC:50771]

Location

Chromosome 7: 54,330,779-54,349,847 forward strand.

About this transcript

This transcript has 5 exons, is associated with 8670 variant alleles and maps to 208 oligo probes.

Gene

This transcript is a product of gene ENSG00000231427.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000659445.1	LINC01445-205	6099	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000669611.2	LINC01445-212	1321	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000668540.1	LINC01445-210	1292	No protein	-	lncRNA	-	-
ENST00000654951.1	LINC01445-204	1273	No protein	-	lncRNA	-	-
ENST00000661025.1	LINC01445-207	1222	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000660245.1	LINC01445-206	1206	No protein	-	lncRNA	-	-
ENST00000669187.1	LINC01445-211	1196	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426205.2	LINC01445-201	1143	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000666668.1	LINC01445-209	807	No protein	-	lncRNA	-	-
ENST00000669718.1	LINC01445-213	797	No protein	-	lncRNA	-	-
ENST00000654826.1	LINC01445-203	732	No protein	-	lncRNA	-	-
ENST00000458615.5	LINC01445-202	679	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000666100.1	LINC01445-208	569	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,222 bps,

Version

ENST00000661025.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000661025.1 LINC01445-207

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Transcript: ENST00000661025.1 LINC01445-207

Summary

About Us

Get help

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