Transcript: ENST00000583117.1 LINC00200-202

Description

long intergenic non-protein coding RNA 200 [Source:HGNC Symbol;Acc:HGNC:30974]

Gene Synonyms

C10ORF139, FLJ40354, NCRNA00200

Location

Chromosome 10: 1,159,804-1,160,997 forward strand.

About this transcript

This transcript has 2 exons, is associated with 685 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSG00000229205.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000655745.1	LINC00200-205	1218	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000425630.2	LINC00200-201	2874	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000647993.1	LINC00200-203	2364	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000666348.1	LINC00200-206	1631	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583117.1	LINC00200-202	632	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000652683.1	LINC00200-204	581	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 632 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000583117.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000583117.1 LINC00200-202

Summary

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Transcript: ENST00000583117.1 LINC00200-202

Summary

About Us

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