Transcript: ENST00000637328.1 LINC01548-202

Description

long intergenic non-protein coding RNA 1548 [Source:HGNC Symbol;Acc:HGNC:1296]

Gene Synonyms

C21ORF54

Location

About this transcript

This transcript has 4 exons, is associated with 2105 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000451980.4	LINC01548-201	1357	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000637328.1	LINC01548-202	454	No protein	-	lncRNA		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 454 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000637328.1

Type

LncRNA

Annotation Method

Long intergenic non-coding RNAs (lincRNAs) were annotated by the Ensembl lincRNA annotation pipeline.