Transcript: ENST00000654338.1 LINC01830-205

Description

long intergenic non-protein coding RNA 1830 [Source:HGNC Symbol;Acc:HGNC:52636]

Location

Chromosome 2: 22,517,936-22,536,322 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 9009 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene ENSG00000228999.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000450551.1	LINC01830-202	636	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000637384.1	LINC01830-203	3185	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000662115.1	LINC01830-206	3027	No protein	-	lncRNA	-	-
ENST00000430520.2	LINC01830-201	3010	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000669355.1	LINC01830-209	2067	No protein	-	lncRNA	-	-
ENST00000650514.1	LINC01830-204	1238	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000668119.1	LINC01830-207	1182	No protein	-	lncRNA	-	-
ENST00000654338.1	LINC01830-205	825	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000669301.1	LINC01830-208	591	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 825 bps,

Version

ENST00000654338.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000654338.1 LINC01830-205

Summary

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Transcript: ENST00000654338.1 LINC01830-205

Summary

About Us

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