Description

ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 [Source:HGNC Symbol;Acc:HGNC:811]

Synonyms

ATP2A, SERCA1

Location
Gene

This transcript is a product of gene ENSG00000196296

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
ATP2A1-002ENST000003955033536 bp994 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42139B3KS35 H3BUU3 O14983
NM_004320
NP_004311
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP2A1-001ENST000003570843532 bp1001 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10643H3BUU3 O14983 NM_173201
NP_775293
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP2A1-003ENST000005363763130 bp869 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS66997B3KS35 H3BUU3 O14983
NM_001286075
NP_001273004
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP2A1-008ENST00000562185576 bp26 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BUU3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATP2A1-007ENST00000563975545 bp114 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BVB2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATP2A1-010ENST00000564112195 bp24 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP2A1-009ENST00000564732831 bp128 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP2A1-005ENST00000564470467 bp41 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BTF1 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP2A1-006ENST00000565042239 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Statistics

Exons: 3 Coding exons: 1 Transcript length: 576 bps Translation length: 26 residues

Ensembl version

ENST00000562185.2

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays