Description

intraflagellar transport 140 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:HGNC:29077]

Synonyms

gs114, KIAA0590, WDTC2

Location
Gene

This transcript is a product of gene ENSG00000187535

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
IFT140-001ENST000004265085270 bp1462 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10439H3BNC5 H3BTA5 Q96RY7
Q9UG52
NM_014714
NP_055529
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
IFT140-006ENST000003613392987 bp656 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9UG52 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
IFT140-007ENST00000569646643 bp121 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BNC5 H3BTA5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
IFT140-012ENST00000569812452 bp113 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BTA5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
IFT140-011ENST00000568837414 bp125 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L0Y8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
IFT140-002ENST000003974174023 bp206 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3KPW0 -
IFT140-003ENST000004399872580 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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IFT140-005ENST000005652984727 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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IFT140-009ENST00000561954826 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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IFT140-010ENST00000566818722 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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IFT140-008ENST00000566052544 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 31 Coding exons: 29 Transcript length: 5,270 bps Translation length: 1,462 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10439

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96RY7

Ensembl version

ENST00000426508.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays