Description

beta-1,4-N-acetyl-galactosaminyl transferase 4 [Source:HGNC Symbol;Acc:HGNC:26315]

Synonyms

FLJ25045, NGalNAc-T1

Location
Gene

This transcript is a product of gene ENSG00000182272

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
B4GALNT4-001ENST000003299623444 bp1039 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7694Q76KP1 NM_178537
NP_848632
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
B4GALNT4-005ENST00000534778876 bp53 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YCU7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
B4GALNT4-004ENST00000526584421 bp26 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YDW6 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
B4GALNT4-003ENST00000524443420 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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B4GALNT4-002ENST00000530717409 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 3 Coding exons: 2 Transcript length: 876 bps Translation length: 53 residues

Ensembl version

ENST00000534778.1

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays