Description

chemokine (C-C motif) ligand 13 [Source:HGNC Symbol;Acc:HGNC:10611]

Synonyms

CKb10, MCP-4, MGC17134, NCC-1, SCYA13, SCYL1

Location
Gene

This transcript is a product of gene ENSG00000181374

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
CCL13-001ENST0000022584485198 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11281Q99616 NM_005408
NP_005399
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CCL13-002ENST0000057768166963 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O95690 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 3 Coding exons: 3 Transcript length: 851 bps Translation length: 98 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11281

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99616

Transcript Support Level

1

Ensembl version

ENST00000225844.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays