Transcript: ENST00000644946.1 GIPC3-202

Description

GIPC PDZ domain containing family member 3 [Source:HGNC Symbol;Acc:HGNC:18183]

Gene Synonyms

C19ORF64, DFNB15, DFNB72, DFNB95

Location

Chromosome 19: 3,585,598-3,593,288 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 27 domains and features, is associated with 4525 variant alleles and maps to 313 oligo probes.

Gene

This transcript is a product of gene ENSG00000179855.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000644452.3	GIPC3-201	4410	312aa	ENSP00000493901.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32871	Q8TF64	NM_133261.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000644946.1	GIPC3-202	4050	1349aa	ENSP00000495068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS92487	A0A2R8Y651	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,050 bps, Translation length: 1,349 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS92487

Version

ENST00000644946.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000644946.1 GIPC3-202

Summary

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Transcript: ENST00000644946.1 GIPC3-202

Summary

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