Description

major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:HGNC:4944]

Synonyms

CELIAC1, HLA-DQB, IDDM1

Location
About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 427 variations and maps to 24 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HLA-DQB1-003ENST000003990841734261aaENSP00000382034
 
Protein coding
CCDS43451Q5Y7D6 -TSL:NAGENCODE basicAPPRIS P3
HLA-DQB1-002ENST000003749431656269aaENSP00000364080
 
Protein coding
CCDS59006Q5SU54 NM_001243961
NP_001230890
TSL:NAGENCODE basicAPPRIS ALT2
HLA-DQB1-001ENST000004346511642261aaENSP00000407332
 
Protein coding
CCDS43451Q5Y7D6 NM_002123
NP_002114
TSL:NAGENCODE basicAPPRIS P3
HLA-DQB1-004ENST000003990791501224aaENSP00000382029
 
Protein coding
-A2AAZ0 -TSL:NAGENCODE basic
HLA-DQB1-007ENST000003990821219134aaENSP00000382032
 
Protein coding
-A2AAY8 -TSL:NAGENCODE basic
HLA-DQB1-008ENST00000484729783136aaENSP00000436686
 
Nonsense mediated decay
-E9PIB1 -TSL:NA
HLA-DQB1-009ENST00000460185428No protein-
 
Processed transcript
---TSL:NA
HLA-DQB1-010ENST00000443574309No protein-
 
Processed transcript
---TSL:NA
HLA-DQB1-005ENST000004876764644No protein-
 
Retained intron
---TSL:NA
Statistics

Exons: 5 Coding exons: 5 Transcript length: 1,642 bps Translation length: 261 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS43451

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000434651.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays