Description

forkhead box A3 [Source:HGNC Symbol;Acc:HGNC:5023]

Synonyms

HNF3G

Location
Gene

This transcript is a product of gene ENSG00000170608

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
FOXA3-001ENST000003021771989350 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12677A0A024R0R3 M0QZW5 P55318
NM_004497
NP_004488
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
FOXA3-002ENST00000594297538102 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0QZW5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 2 Coding exons: 2 Transcript length: 1,989 bps Translation length: 350 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS12677

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55318

Transcript Support Level

1

Ensembl version

ENST00000302177.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays