Description

tubulin, alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]

Synonyms

bcm948, MGC10851, MGC14580, TUBA6

Location
Gene

This transcript is a product of gene ENSG00000167553

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
TUBA1C-001ENST000003010723001 bp449 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8782F8VRK0 F8VRZ4 F8VWV9
F8VX09 F8VXZ7 Q9BQE3
NM_032704
NP_116093
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TUBA1C-002ENST000005413641695 bp519 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H5D3 F8VRK0 F8VRZ4
F8VWV9 F8VX09 F8VXZ7
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TUBA1C-006ENST00000549183696 bp130 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VRK0 F8VS66 F8VWV9
F8VX09 F8VXZ7
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TUBA1C-003ENST000005524481800 bp88 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8VRK1 -
TUBA1C-009ENST00000552125575 bp82 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TUBA1C-008ENST00000549818536 bp88 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8VRK1 -
TUBA1C-004ENST00000550574573 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
TUBA1C-005ENST00000549554560 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
TUBA1C-007ENST000005484701105 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 4 Coding exons: 4 Transcript length: 3,001 bps Translation length: 449 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8782

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQE3

Ensembl version

ENST00000301072.7

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays