Description

galanin receptor 1 [Source:HGNC Symbol;Acc:HGNC:4132]

Synonyms

GALNR, GALNR1

Location
About this transcript

This transcript has 3 exons, is annotated with 38 domains and features, is associated with 138 variations and maps to 10 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GALR1-001ENST0000029972710044349aaENSP00000299727
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12012P47211 NM_001480
NP_001471
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
GALR1-002ENST00000582943315No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 3 Coding exons: 3 Transcript length: 10,044 bps Translation length: 349 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS12012

Uniprot

This transcript corresponds to the following Uniprot identifiers: P47211

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000299727.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays