Description

paired-like homeodomain 2 [Source:HGNC Symbol;Acc:HGNC:9005]

Synonyms

ARP1, Brx1, IGDS, IHG2, IRID2, Otlx2, RGS, RIEG, RIEG1, RS

Gene

This transcript is a product of gene ENSG00000164093

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PITX2-003ENST000003549253359 bp317 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3692D6RFI4 Q99697 NM_001204397
NP_001191326
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-201ENST000006130943240 bp317 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3692D6RFI4 NM_153426
NP_700475
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-203ENST000006166413102 bp271 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3693D6RBG8 NM_001204399
NM_153427
NP_001191328
NP_700476
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-005ENST000003067322320 bp324 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3694Q99697 NM_000325
NP_000316
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-002ENST000003550802100 bp271 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3693D6RBG8 Q99697 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-001ENST000003945981906 bp317 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3692D6RFI4 Q99697 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-202ENST000006144231866 bp317 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3692D6RFI4 NM_001204398
NP_001191327
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-010ENST000005571191889 bp264 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-U3KQ81 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-004ENST000003945951693 bp174 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8MUL9 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX2-006ENST000005118371085 bp290 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RFI4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PITX2-007ENST00000511990463 bp118 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RBG8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PITX2-008ENST00000556049941 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PITX2-009ENST000006078681398 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 7 Coding exons: 4 Transcript length: 3,359 bps Translation length: 317 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3692

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99697

Ensembl version

ENST00000354925.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays