Description

collagen, type VI, alpha 3 [Source:HGNC Symbol;Acc:HGNC:2213]

Synonyms

Gene

This transcript is a product of gene ENSG00000163359

This gene has 14 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
COL6A3-001ENST0000029555010749 bp3177 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33412D9ZGF2 P12111 Q8N4Z1
NM_004369
NP_004360
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-202ENST000003535789963 bp2971 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33409P12111 Q8N4Z1 NM_057167
NP_476508
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-011ENST000004098098916 bp2971 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33409P12111 Q8N4Z1 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-012ENST000004720568628 bp2570 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33410P12111 Q8N4Z1 NM_057166
NP_476507
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-002ENST000003920044037 bp1237 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33411P12111 NM_057165
NP_476506
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-003ENST000003920033464 bp1036 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54439P12111 NM_057164
NP_476505
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-201ENST000003474018625 bp2569 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-008ENST000004337622379 bp708 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JNG9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
COL6A3-004ENST00000491233652 bp173 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L392 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
COL6A3-005ENST000004732585433 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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COL6A3-006ENST00000493608742 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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COL6A3-009ENST000004917696731 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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COL6A3-007ENST00000493475669 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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COL6A3-010ENST00000468792329 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 41 Coding exons: 40 Transcript length: 8,628 bps Translation length: 2,570 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33410

Uniprot

This transcript corresponds to the following Uniprot identifiers: P12111

Ensembl version

ENST00000472056.2

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays