Description

EPH receptor A5 [Source:HGNC Symbol;Acc:HGNC:3389]

Synonyms

CEK7, EHK1, Hek7, TYRO4

Location
About this transcript

This transcript has 17 exons, is annotated with 35 domains and features, is associated with 474 variations and maps to 8 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
EPHA5-202ENST0000062215084211038aaENSP00000480763
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75133B7ZKJ3 NM_001281765
NP_001268694
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
EPHA5-201ENST0000061374083551016aaENSP00000478537
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75131B7ZKW7 NM_001281766
NP_001268695
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
EPHA5-001ENST0000027385482661037aaENSP00000273854
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3513P54756 NM_004439
NP_004430
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
EPHA5-004ENST0000051129451761004aaENSP00000427638
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75132F8VP57 NM_001281767
NP_001268696
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
EPHA5-002ENST0000035483934271015aaENSP00000346899
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3514P54756 NM_182472
NP_872272
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
EPHA5-003ENST000004326383662874aaENSP00000389208
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W9W0 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 17 Coding exons: 17 Transcript length: 5,176 bps Translation length: 1,004 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS75132

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000511294.1

Type

Novel protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays