Description

pancreatic and duodenal homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6107]

Synonyms

IDX-1, IPF1, MODY4, PDX-1, STF-1

Location
Gene

This transcript is a product of gene ENSG00000139515

This gene has 1 transcript (splice variant) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
PDX1-001ENST000003810332501283 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9327P52945 NM_000209
NP_000200
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 2 Coding exons: 2 Transcript length: 2,501 bps Translation length: 283 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9327

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52945

Transcript Support Level

1

Ensembl version

ENST00000381033.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays