Description

adenomatous polyposis coli [Source:HGNC Symbol;Acc:HGNC:583]

Synonyms

DP2, DP2.5, DP3, PPP1R46

Gene

This transcript is a product of gene ENSG00000134982

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
APC-001ENST0000025743010701 bp2843 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4107A1YIQ7 A5HB94 A5HB95
A5HB96 A5HB97 B2ZRE1
D6RFL6 E9PFT7 P25054
Q4LE70 Q9HAW6 Q9P119
Q9UM98
NM_000038
NP_000029
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APC-004ENST0000050837610619 bp2843 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4107A1YIQ7 A5HB94 A5HB95
A5HB96 A5HB97 B2ZRE1
D6RFL6 E9PFT7 P25054
Q4LE70 Q9HAW6 Q9P119
Q9UM98
NM_001127510
NP_001120982
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APC-005ENST000005122114061 bp1305 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A5HB96 A5HB97 D6RFL6
E9PFT7 Q9HAW6 Q9P119
Q9UM98
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
APC-002ENST000005073793602 bp1135 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A5HB96 A5HB97 B7Z2B6
Q9HAW6 Q9P119 Q9UM98
NM_001127511
NP_001120983
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
APC-011ENST00000504915817 bp272 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9HAW6 Q9P119 R4GMU6
-CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
APC-008ENST00000509732524 bp118 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RFL6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
APC-003ENST000005086247406 bp287 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RFL6 E7EMH9 Q9UM98
-
APC-007ENST000005023712630 bp51 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
APC-012ENST00000505350573 bp58 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---
APC-006ENST000005050841212 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 17 Coding exons: 15 Transcript length: 10,619 bps Translation length: 2,843 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4107

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25054

Ensembl version

ENST00000508376.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays