Description

retinoic acid receptor, alpha [Source:HGNC Symbol;Acc:HGNC:9864]

Synonyms

NR1B1, RAR

Location
Gene

This transcript is a product of gene ENSG00000131759

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
RARA-007ENST000004257073041 bp365 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45671P10276 NM_001145302
NP_001138774
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RARA-001ENST000002540662414 bp462 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11366J3KSJ4 J3QRM2 P10276
Q6I9R7
NM_000964
NP_000955
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RARA-004ENST000003940812285 bp457 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42317F1D8N9 J3KSJ4 P10276
NM_001024809
NP_001019980
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RARA-002ENST000003940892024 bp462 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11366J3KSJ4 J3QRM2 P10276
Q6I9R7
NM_001145301
NP_001138773
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RARA-201ENST000006177262786 bp635 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RARA-003ENST000003940862008 bp478 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8MUP8 J3KSJ4 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RARA-005ENST00000475125813 bp186 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KSJ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
RARA-008ENST00000577646733 bp66 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QRM2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
RARA-006ENST000004200421052 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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RARA-009ENST00000582914581 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
RARA-010ENST00000579727564 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Statistics

Exons: 9 Coding exons: 8 Transcript length: 2,414 bps Translation length: 462 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11366

Uniprot

This transcript corresponds to the following Uniprot identifiers: P10276

Ensembl version

ENST00000254066.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays