Description

amelogenin, X-linked [Source:HGNC Symbol;Acc:HGNC:461]

Synonyms

AIH1, AMG

Location
About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 93 variations and maps to 13 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
AMELX-002ENST00000380712835205aaENSP00000370088
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14145Q99217 NM_182680
NP_872621
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
AMELX-001ENST00000380714793191aaENSP00000370090
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14144Q99217 NM_001142
NP_001133
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
AMELX-201ENST00000348912737175aaENSP00000335312
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14146Q99217 NM_182681
NP_872622
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 6 Coding exons: 5 Transcript length: 793 bps Translation length: 191 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS14144

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99217

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000380714.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays