Description

potassium channel, inwardly rectifying subfamily J, member 5 [Source:HGNC Symbol;Acc:HGNC:6266]

Synonyms

CIR, GIRK4, KATP1, Kir3.4, LQT13

About this transcript

This transcript has 2 exons, is annotated with 18 domains and features, is associated with 185 variations and maps to 11 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
KCNJ5-001ENST000005296945940419aaENSP00000433295
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8479P48544 NM_000890
NP_000881
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KCNJ5-003ENST000003383501734419aaENSP00000339960
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8479P48544 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KCNJ5-002ENST000005335991350419aaENSP00000434266
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8479P48544 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 2 Coding exons: 2 Transcript length: 1,350 bps Translation length: 419 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8479

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48544

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000533599.1

Type

Putative protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays