Description

NK2 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:7836]

Synonyms

CSX3, NKX2.3, NKX2C, NKX4-3

Location
Gene

This transcript is a product of gene ENSG00000119919

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
NKX2-3-001ENST000003445862097364 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41558Q8TAU0 NM_145285
NP_660328
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
NKX2-3-201ENST000006223831986296 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 2 Coding exons: 2 Transcript length: 2,097 bps Translation length: 364 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS41558

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TAU0

Transcript Support Level

2

Ensembl version

ENST00000344586.8

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays