Description

polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]

Synonyms

GalNAc-T3, HFTC, HHS

Gene

This transcript is a product of gene ENSG00000115339

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
GALNT3-001ENST000003927013868 bp633 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2226C9J2C3 C9J388 C9JW45
C9JXX2 Q14435
NM_004482
NP_004473
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GALNT3-010ENST000004098822107 bp371 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EUL0 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GALNT3-004ENST000004122481954 bp464 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J2C3 C9J388 C9JW45
C9JXX2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
GALNT3-006ENST00000447156570 bp11 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
GALNT3-002ENST00000414977559 bp57 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JW45 C9JXX2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
GALNT3-005ENST00000431484540 bp90 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J388 C9JW45 C9JXX2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
GALNT3-003ENST00000422973536 bp25 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JW45 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
GALNT3-007ENST00000437849799 bp89 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H7BZS4 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
GALNT3-008ENST00000463254603 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 11 Coding exons: 10 Transcript length: 3,868 bps Translation length: 633 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2226

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14435

Ensembl version

ENST00000392701.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays