Description

lymphotoxin beta receptor (TNFR superfamily, member 3) [Source:HGNC Symbol;Acc:HGNC:6718]

Synonyms

D12S370, TNF-R-III, TNFCR, TNFR-RP, TNFR2-RP, TNFRSF3

Location
About this transcript

This transcript has 10 exons, is annotated with 27 domains and features, is associated with 109 variations and maps to 31 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
LTBR-001ENST000002289182260435aaENSP00000228918
 
Protein coding
CCDS8544P36941 NM_002342
NP_002333
TSL:1GENCODE basicAPPRIS P3
LTBR-003ENST000005399251665416aaENSP00000440875
 
Protein coding
CCDS59233P36941 NM_001270987
NP_001257916
TSL:2GENCODE basicAPPRIS ALT2
LTBR-010ENST000005411021084292aaENSP00000438605
 
Protein coding
-F5H2E7 -TSL:5GENCODE basic
LTBR-014ENST00000536876842218aaENSP00000437647
 
Protein coding
-F5H6F8 -CDS 3' incompleteTSL:5
LTBR-012ENST0000054319078574aaENSP00000438955
 
Protein coding
-F5H1S5 -TSL:3GENCODE basic
LTBR-006ENST00000544454632148aaENSP00000437954
 
Nonsense mediated decay
-F5H627 -TSL:5
LTBR-004ENST00000546296783No protein-
 
Processed transcript
---TSL:4
LTBR-005ENST00000542830539No protein-
 
Processed transcript
---TSL:4
LTBR-009ENST000004410742327No protein-
 
Retained intron
---TSL:1
LTBR-002ENST000004448141553No protein-
 
Retained intron
---TSL:2
LTBR-013ENST00000535739928No protein-
 
Retained intron
---TSL:5
LTBR-011ENST00000440421729No protein-
 
Retained intron
---TSL:2
LTBR-008ENST00000541005583No protein-
 
Retained intron
---TSL:2
LTBR-015ENST00000545445379No protein-
 
Retained intron
---TSL:2
LTBR-007ENST00000543542367No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 10 Coding exons: 10 Transcript length: 1,665 bps Translation length: 416 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS59233

Uniprot

This transcript corresponds to the following Uniprot identifiers: P36941

Transcript Support Level (TSL)

TSL:2

Ensembl version

ENST00000539925.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays