Description

crystallin, alpha B [Source:HGNC Symbol;Acc:HGNC:2389]

Synonyms

CRYA2, HSPB5

Gene

This transcript is a product of gene ENSG00000109846

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
CRYAB-002ENST000005334751119175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 E9PJL7 E9PNH7
E9PR44 E9PRS4 E9PS12
P02511 V9HW27
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
CRYAB-001ENST000005261801017175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 E9PJL7 E9PNH7
E9PR44 E9PRS4 E9PS12
P02511 V9HW27
NM_001289807
NM_001289808
NM_001885
NP_001276736
NP_001276737
NP_001876
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
CRYAB-015ENST000005311981013175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 E9PJL7 E9PNH7
E9PR44 E9PRS4 E9PS12
P02511 V9HW27
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
CRYAB-201ENST00000616970977175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 E9PJL7 E9PNH7
E9PR44 E9PRS4 E9PS12
P02511 V9HW27
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
CRYAB-013ENST00000527950887175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 E9PJL7 E9PNH7
E9PR44 E9PRS4 E9PS12
P02511 V9HW27
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
CRYAB-003ENST00000227251848175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 E9PJL7 E9PNH7
E9PR44 E9PRS4 E9PS12
P02511 V9HW27
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
CRYAB-004ENST00000533971981155 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PRA8 E9PRS4 E9PS12
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CRYAB-005ENST00000527899965174 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PJL7 E9PNH7 E9PR44
E9PRS4 E9PS12
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
CRYAB-008ENST00000525823915108 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024R3B9 E9PNH7 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CRYAB-014ENST00000529647695130 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PJL7 E9PRS4 E9PS12
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-007ENST0000052862862477 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PRS4 E9PS12 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-011ENST00000533280545108 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024R3B9 E9PNH7 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CRYAB-010ENST00000526167517106 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PNH7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-006ENST0000053387947969 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PRS4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-012ENST00000524660464106 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-009ENST00000528961353108 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024R3B9 E9PNH7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 5 Coding exons: 3 Transcript length: 1,013 bps Translation length: 175 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8351

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02511

Transcript Support Level

5

Ensembl version

ENST00000531198.3

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays