Description

ubiquitin specific peptidase 31 [Source:HGNC Symbol;Acc:HGNC:20060]

Synonyms

KIAA1203

Location
About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 70 variations and maps to 14 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
USP31-001ENST00000219689106991352aaENSP00000219689
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10607Q70CQ4 NM_020718
NP_065769
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

USP31-004ENST000005679752142645aaENSP00000461621
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L4X5 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
USP31-005ENST000005635251560266aaENSP00000481339
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WXV9 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 5 Coding exons: 5 Transcript length: 1,560 bps Translation length: 266 residues

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000563525.2

Type

Putative protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays