Transcript: ENST00000368721.5 DHX32-202

Description

DEAH-box helicase 32 (putative) [Source:HGNC Symbol;Acc:HGNC:16717]

Gene Synonyms

DDX32, DHLP1, FLJ10694, FLJ10889

Location

Chromosome 10: 125,836,337-125,854,859 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 7891 variant alleles and maps to 367 oligo probes.

Gene

This transcript is a product of gene ENSG00000089876.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000284690.4	DHX32-201	3050	743aa	ENSP00000284690.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7652	Q7L7V1-1	NM_018180.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000368721.5	DHX32-202	2389	367aa	ENSP00000357710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		X6R717	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000415732.1	DHX32-203	803	112aa	ENSP00000406781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		X6RHK1	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,389 bps, Translation length: 367 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000368721.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000368721.5 DHX32-202

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Transcript: ENST00000368721.5 DHX32-202

Summary

About Us

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