Description

notch 3 [Source:HGNC Symbol;Acc:HGNC:7883]

Synonyms

CADASIL, CASIL

Location
Gene

This transcript is a product of gene ENSG00000074181

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
NOTCH3-001ENST000002633888666 bp2321 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12326Q9UM47 NM_000435
NP_000426
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NOTCH3-002ENST000006010113858 bp1286 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0R3C9 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
NOTCH3-006ENST00000597756559 bp177 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
NOTCH3-005ENST00000595514564 bp117 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
NOTCH3-004ENST00000600841748 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
NOTCH3-003ENST00000595045558 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 33 Coding exons: 33 Transcript length: 8,666 bps Translation length: 2,321 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS12326

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UM47

Ensembl version

ENST00000263388.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays