Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:HGNC:11109]

Synonyms

BAF57

Location
Gene

This transcript is a product of gene ENSG00000073584

This gene has 19 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SMARCE1-001ENST000003485135840 bp411 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11370B4DGM3 C0IMW8 J3KT85
J3QKX6 J3QR61 Q969G3
NM_003079
NP_003070
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-006ENST000004742462124 bp77 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QL66 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-012ENST000004318891569 bp393 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B4DGM3 C0IMW8 J3KT85
J3QR61
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-008ENST000003778081307 bp328 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C048 J3KT85 Q969G3
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-015ENST000004001221263 bp293 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C048 J3KT85 Q969G3
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-013ENST000005804191228 bp376 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KT85 Q969G3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-014ENST000005780441184 bp341 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KT85 Q969G3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-018ENST000004783491090 bp288 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C0IMW8 J3KT85 J3QKS7
J3QR61
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCE1-009ENST00000264640631 bp177 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C048 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SMARCE1-019ENST00000582955621 bp129 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QKX6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCE1-016ENST00000580654554 bp153 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C0IMW8 J3KT85 J3QR61
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCE1-010ENST00000447024536 bp157 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C048 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SMARCE1-017ENST00000577721449 bp101 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KT85 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCE1-011ENST000005781122384 bp52 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3QS32 -
SMARCE1-007ENST00000481231695 bp55 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3KS99 -
SMARCE1-004ENST000004936602284 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SMARCE1-003ENST000004693342128 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SMARCE1-020ENST00000578995534 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SMARCE1-021ENST00000583294476 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 11 Coding exons: 10 Transcript length: 5,840 bps Translation length: 411 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11370

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q969G3

Ensembl version

ENST00000348513.7

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays