Description

X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:HGNC Symbol;Acc:HGNC:12828]

Synonyms

RCC

FAST1

Location
Gene

This transcript is a product of gene ENSG00000073050

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
XRCC1-001ENST000002628872802 bp633 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12624M4WFF9 P18887 Q59HH7
V9VB20
NM_006297
NP_006288
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
XRCC1-002ENST000005439821994 bp602 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M4WFF9 V9VB20 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
XRCC1-008ENST00000598165913 bp292 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0QYS5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
XRCC1-009ENST00000599693628 bp210 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
XRCC1-003ENST00000594107586 bp172 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0R0D2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
XRCC1-007ENST00000597811809 bp165 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
XRCC1-006ENST000005957891147 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
XRCC1-005ENST00000598422701 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
XRCC1-004ENST00000594511571 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 17 Coding exons: 17 Transcript length: 2,802 bps Translation length: 633 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS12624

Uniprot

This transcript corresponds to the following Uniprot identifiers: P18887

Ensembl version

ENST00000262887.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays